Cluster: Rep_107_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_107
- CGC Family ID: CGCFAM_00022
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_107_c_1 | Rep_107_c_1_84 | 101675 | 102280 | - | 9.B.18.1.2 |
| CAZyme | Rep_107_c_1 | Rep_107_c_1_85 | 102364 | 103536 | - | GT4 |
| CAZyme | Rep_107_c_1 | Rep_107_c_1_86 | 103566 | 104690 | - | GT4 |
| NULL(UNKNOWN) | Rep_107_c_1 | Rep_107_c_1_87 | 104905 | 106089 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_107_c_1 | Rep_107_c_1_88 | 106189 | 107454 | - | 2.A.66.2.10 |
Gene ID: Rep_107_c_1_84
Type: TC
Location: 101675 - 102280 (-)
Type: TC
Location: 101675 - 102280 (-)
Gene ID: Rep_107_c_1_85
Type: CAZyme
Location: 102364 - 103536 (-)
Type: CAZyme
Location: 102364 - 103536 (-)
Gene ID: Rep_107_c_1_86
Type: CAZyme
Location: 103566 - 104690 (-)
Type: CAZyme
Location: 103566 - 104690 (-)
Gene ID: Rep_107_c_1_87
Type:
Location: 104905 - 106089 (-)
Type:
Location: 104905 - 106089 (-)
Gene ID: Rep_107_c_1_88
Type: TC
Location: 106189 - 107454 (-)
Type: TC
Location: 106189 - 107454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp902489635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.