Cluster: Rep_1078_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1078
- CGC Family ID: CGCFAM_03740
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1078_c_31 | Rep_1078_c_31_2 | 951 | 1964 | - | GT28 |
| TC | Rep_1078_c_31 | Rep_1078_c_31_3 | 1967 | 3136 | - | 2.A.103.1.3 |
| TC | Rep_1078_c_31 | Rep_1078_c_31_4 | 3142 | 5277 | - | 3.A.12.1.1 |
| TC | Rep_1078_c_31 | Rep_1078_c_31_5 | 5449 | 6696 | - | 3.A.15.2.1 |
| TC | Rep_1078_c_31 | Rep_1078_c_31_6 | 6696 | 8456 | - | 3.A.15.4.1 |
Gene ID: Rep_1078_c_31_2
Type: CAZyme
Location: 951 - 1964 (-)
Type: CAZyme
Location: 951 - 1964 (-)
Gene ID: Rep_1078_c_31_3
Type: TC
Location: 1967 - 3136 (-)
Type: TC
Location: 1967 - 3136 (-)
Gene ID: Rep_1078_c_31_4
Type: TC
Location: 3142 - 5277 (-)
Type: TC
Location: 3142 - 5277 (-)
Gene ID: Rep_1078_c_31_5
Type: TC
Location: 5449 - 6696 (-)
Type: TC
Location: 5449 - 6696 (-)
Gene ID: Rep_1078_c_31_6
Type: TC
Location: 6696 - 8456 (-)
Type: TC
Location: 6696 - 8456 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.