Cluster: Rep_1078_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1078_c_14 | Rep_1078_c_14_20 | 22482 | 23630 | + | GT30 |
| pfam | Rep_1078_c_14 | Rep_1078_c_14_21 | 23620 | 24393 | + | PseudoU_synth_2 |
| TC | Rep_1078_c_14 | Rep_1078_c_14_22 | 24454 | 25791 | + | 3.A.5.1.1 |
Gene ID: Rep_1078_c_14_20
Type: CAZyme
Location: 22482 - 23630 (+)
Type: CAZyme
Location: 22482 - 23630 (+)
Gene ID: Rep_1078_c_14_21
Type: pfam
Location: 23620 - 24393 (+)
Type: pfam
Location: 23620 - 24393 (+)
Gene ID: Rep_1078_c_14_22
Type: TC
Location: 24454 - 25791 (+)
Type: TC
Location: 24454 - 25791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.