Cluster: Rep_1078_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1078
- CGC Family ID: CGCFAM_00234
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1078_c_12 | Rep_1078_c_12_20 | 21590 | 21958 | - | 2.A.7.34.6 |
| pfam | Rep_1078_c_12 | Rep_1078_c_12_21 | 21960 | 24575 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| peptidase | Rep_1078_c_12 | Rep_1078_c_12_22 | 24638 | 29752 | - | I39.UPW |
| CAZyme | Rep_1078_c_12 | Rep_1078_c_12_23 | 29753 | 31564 | - | GT51 |
Gene ID: Rep_1078_c_12_20
Type: TC
Location: 21590 - 21958 (-)
Type: TC
Location: 21590 - 21958 (-)
Gene ID: Rep_1078_c_12_21
Type: pfam
Location: 21960 - 24575 (-)
Type: pfam
Location: 21960 - 24575 (-)
Gene ID: Rep_1078_c_12_22
Type: peptidase
Location: 24638 - 29752 (-)
Type: peptidase
Location: 24638 - 29752 (-)
Gene ID: Rep_1078_c_12_23
Type: CAZyme
Location: 29753 - 31564 (-)
Type: CAZyme
Location: 29753 - 31564 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.