Cluster: Rep_1078_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1078_c_5 | Rep_1078_c_5_39 | 31016 | 32740 | + | 5.A.1.1.1 |
| NULL(UNKNOWN) | Rep_1078_c_5 | Rep_1078_c_5_40 | 32964 | 33107 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1078_c_5 | Rep_1078_c_5_41 | 33191 | 34111 | - | 3.A.1.20.3 |
| TC | Rep_1078_c_5 | Rep_1078_c_5_42 | 34108 | 34800 | - | 3.A.1.6.2 |
| TC | Rep_1078_c_5 | Rep_1078_c_5_43 | 34952 | 35779 | + | 3.A.1.6.2 |
| CAZyme | Rep_1078_c_5 | Rep_1078_c_5_44 | 35816 | 37765 | - | GT51 |
Gene ID: Rep_1078_c_5_39
Type: TC
Location: 31016 - 32740 (+)
Type: TC
Location: 31016 - 32740 (+)
Gene ID: Rep_1078_c_5_40
Type:
Location: 32964 - 33107 (+)
Type:
Location: 32964 - 33107 (+)
Gene ID: Rep_1078_c_5_41
Type: TC
Location: 33191 - 34111 (-)
Type: TC
Location: 33191 - 34111 (-)
Gene ID: Rep_1078_c_5_42
Type: TC
Location: 34108 - 34800 (-)
Type: TC
Location: 34108 - 34800 (-)
Gene ID: Rep_1078_c_5_43
Type: TC
Location: 34952 - 35779 (+)
Type: TC
Location: 34952 - 35779 (+)
Gene ID: Rep_1078_c_5_44
Type: CAZyme
Location: 35816 - 37765 (-)
Type: CAZyme
Location: 35816 - 37765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.