Cluster: Rep_1078_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_1078
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1078_c_1 | Rep_1078_c_1_29 | 25459 | 26064 | - | 9.B.18.1.2 |
| CAZyme | Rep_1078_c_1 | Rep_1078_c_1_30 | 26057 | 27172 | - | GT4 |
| CAZyme | Rep_1078_c_1 | Rep_1078_c_1_31 | 27182 | 29266 | - | GT66 |
| CAZyme | Rep_1078_c_1 | Rep_1078_c_1_32 | 29253 | 30398 | - | GT4 |
| CAZyme | Rep_1078_c_1 | Rep_1078_c_1_33 | 30395 | 31387 | - | GT2 |
| CAZyme | Rep_1078_c_1 | Rep_1078_c_1_34 | 31377 | 32417 | - | GT4 |
Gene ID: Rep_1078_c_1_29
Type: TC
Location: 25459 - 26064 (-)
Type: TC
Location: 25459 - 26064 (-)
Gene ID: Rep_1078_c_1_30
Type: CAZyme
Location: 26057 - 27172 (-)
Type: CAZyme
Location: 26057 - 27172 (-)
Gene ID: Rep_1078_c_1_31
Type: CAZyme
Location: 27182 - 29266 (-)
Type: CAZyme
Location: 27182 - 29266 (-)
Gene ID: Rep_1078_c_1_32
Type: CAZyme
Location: 29253 - 30398 (-)
Type: CAZyme
Location: 29253 - 30398 (-)
Gene ID: Rep_1078_c_1_33
Type: CAZyme
Location: 30395 - 31387 (-)
Type: CAZyme
Location: 30395 - 31387 (-)
Gene ID: Rep_1078_c_1_34
Type: CAZyme
Location: 31377 - 32417 (-)
Type: CAZyme
Location: 31377 - 32417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.