Cluster: Rep_1076_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1076
- CGC Family ID: CGCFAM_05109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1076_c_120 | Rep_1076_c_120_3 | 1161 | 2291 | + | GT30 |
| pfam | Rep_1076_c_120 | Rep_1076_c_120_4 | 2301 | 3065 | + | PseudoU_synth_2 |
| TC | Rep_1076_c_120 | Rep_1076_c_120_5 | 3123 | 4607 | - | 1.B.52.2.1 |
Gene ID: Rep_1076_c_120_3
Type: CAZyme
Location: 1161 - 2291 (+)
Type: CAZyme
Location: 1161 - 2291 (+)
Gene ID: Rep_1076_c_120_4
Type: pfam
Location: 2301 - 3065 (+)
Type: pfam
Location: 2301 - 3065 (+)
Gene ID: Rep_1076_c_120_5
Type: TC
Location: 3123 - 4607 (-)
Type: TC
Location: 3123 - 4607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Species
Campylobacter fetus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.