Cluster: Rep_1074_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1074
- CGC Family ID: CGCFAM_01722
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1074_c_6 | Rep_1074_c_6_94 | 84348 | 86567 | - | 1.B.33.1.1 |
| pfam | Rep_1074_c_6 | Rep_1074_c_6_95 | 86644 | 87471 | + | PDH_N | F420_oxidored | PDH_C |
| STP | Rep_1074_c_6 | Rep_1074_c_6_96 | 87551 | 88924 | + | Peptidase_M23 |
| CAZyme | Rep_1074_c_6 | Rep_1074_c_6_97 | 88924 | 89808 | + | CE11 |
Gene ID: Rep_1074_c_6_94
Type: TC
Location: 84348 - 86567 (-)
Type: TC
Location: 84348 - 86567 (-)
Gene ID: Rep_1074_c_6_95
Type: pfam
Location: 86644 - 87471 (+)
Type: pfam
Location: 86644 - 87471 (+)
Gene ID: Rep_1074_c_6_96
Type: STP
Location: 87551 - 88924 (+)
Type: STP
Location: 87551 - 88924 (+)
Gene ID: Rep_1074_c_6_97
Type: CAZyme
Location: 88924 - 89808 (+)
Type: CAZyme
Location: 88924 - 89808 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_D
Species
Campylobacter_D jejuni
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.