dbCAN Logo

Cluster: Rep_1074_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1074_c_4 Rep_1074_c_4_113 105150 105932 + 3.A.1.101.1
TC Rep_1074_c_4 Rep_1074_c_4_114 105929 106591 + 3.A.1.101.1
TC Rep_1074_c_4 Rep_1074_c_4_115 106591 107709 + 8.A.4.1.1
TC Rep_1074_c_4 Rep_1074_c_4_116 107711 109369 + 1.B.18.1.2
STP Rep_1074_c_4 Rep_1074_c_4_117 109379 110326 + CBS | CBS | SIS
CAZyme Rep_1074_c_4 Rep_1074_c_4_118 110328 111980 + GT2
CAZyme Rep_1074_c_4 Rep_1074_c_4_119 111967 113361 + GT2
CAZyme Rep_1074_c_4 Rep_1074_c_4_120 113349 115349 + GT2 | GT8
CAZyme Rep_1074_c_4 Rep_1074_c_4_121 115336 118212 + GT8
Gene ID: Rep_1074_c_4_113
Type: TC
Location: 105150 - 105932 (+)
Gene ID: Rep_1074_c_4_114
Type: TC
Location: 105929 - 106591 (+)
Gene ID: Rep_1074_c_4_115
Type: TC
Location: 106591 - 107709 (+)
Gene ID: Rep_1074_c_4_116
Type: TC
Location: 107711 - 109369 (+)
Gene ID: Rep_1074_c_4_117
Type: STP
Location: 109379 - 110326 (+)
Gene ID: Rep_1074_c_4_118
Type: CAZyme
Location: 110328 - 111980 (+)
Gene ID: Rep_1074_c_4_119
Type: CAZyme
Location: 111967 - 113361 (+)
Gene ID: Rep_1074_c_4_120
Type: CAZyme
Location: 113349 - 115349 (+)
Gene ID: Rep_1074_c_4_121
Type: CAZyme
Location: 115336 - 118212 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List