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Cluster: Rep_1069_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1069_c_28 Rep_1069_c_28_15 16900 17460 + GH23
STP Rep_1069_c_28 Rep_1069_c_28_16 17490 17702 + HMA
TC Rep_1069_c_28 Rep_1069_c_28_17 18167 19597 + 3.A.7.14.2
TC Rep_1069_c_28 Rep_1069_c_28_18 20037 21380 + 3.D.6.1.2
TC Rep_1069_c_28 Rep_1069_c_28_19 21399 22385 + 3.D.6.1.2
TC Rep_1069_c_28 Rep_1069_c_28_20 22385 22951 + 3.D.6.1.2
TC Rep_1069_c_28 Rep_1069_c_28_21 22963 23556 + 3.D.6.1.2
TC Rep_1069_c_28 Rep_1069_c_28_22 23570 24145 + 3.D.6.1.2
TC Rep_1069_c_28 Rep_1069_c_28_23 24161 24958 + 3.D.6.1.2
Gene ID: Rep_1069_c_28_15
Type: CAZyme
Location: 16900 - 17460 (+)
Gene ID: Rep_1069_c_28_16
Type: STP
Location: 17490 - 17702 (+)
Gene ID: Rep_1069_c_28_17
Type: TC
Location: 18167 - 19597 (+)
Gene ID: Rep_1069_c_28_18
Type: TC
Location: 20037 - 21380 (+)
Gene ID: Rep_1069_c_28_19
Type: TC
Location: 21399 - 22385 (+)
Gene ID: Rep_1069_c_28_20
Type: TC
Location: 22385 - 22951 (+)
Gene ID: Rep_1069_c_28_21
Type: TC
Location: 22963 - 23556 (+)
Gene ID: Rep_1069_c_28_22
Type: TC
Location: 23570 - 24145 (+)
Gene ID: Rep_1069_c_28_23
Type: TC
Location: 24161 - 24958 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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