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Cluster: Rep_1069_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1069_c_19 Rep_1069_c_19_9 8479 9849 - 3.A.1.31.2
TC Rep_1069_c_19 Rep_1069_c_19_10 9843 10532 - 3.A.1.31.2
TC Rep_1069_c_19 Rep_1069_c_19_11 10532 11119 - 3.A.1.31.2
TC Rep_1069_c_19 Rep_1069_c_19_12 11141 12865 - 3.A.1.135.5
TC Rep_1069_c_19 Rep_1069_c_19_13 12869 14626 - 3.A.1.21.1
TF Rep_1069_c_19 Rep_1069_c_19_14 14854 15849 + HTH_AraC
CAZyme Rep_1069_c_19 Rep_1069_c_19_15 15967 16815 - GH166
Gene ID: Rep_1069_c_19_9
Type: TC
Location: 8479 - 9849 (-)
Gene ID: Rep_1069_c_19_10
Type: TC
Location: 9843 - 10532 (-)
Gene ID: Rep_1069_c_19_11
Type: TC
Location: 10532 - 11119 (-)
Gene ID: Rep_1069_c_19_12
Type: TC
Location: 11141 - 12865 (-)
Gene ID: Rep_1069_c_19_13
Type: TC
Location: 12869 - 14626 (-)
Gene ID: Rep_1069_c_19_14
Type: TF
Location: 14854 - 15849 (+)
Gene ID: Rep_1069_c_19_15
Type: CAZyme
Location: 15967 - 16815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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