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Cluster: Rep_1069_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1069_c_0 Rep_1069_c_0_60 71619 72281 + 9.B.18.1.3
CAZyme Rep_1069_c_0 Rep_1069_c_0_61 72296 73075 + GT2
CAZyme Rep_1069_c_0 Rep_1069_c_0_62 73115 73927 + GT2
pfam Rep_1069_c_0 Rep_1069_c_0_63 73937 75124 + Glyphos_transf
NULL(UNKNOWN) Rep_1069_c_0 Rep_1069_c_0_64 75147 76268 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1069_c_0 Rep_1069_c_0_65 76281 77045 + GT2
CAZyme Rep_1069_c_0 Rep_1069_c_0_66 77107 78207 + GT4
TC Rep_1069_c_0 Rep_1069_c_0_67 78308 79753 + 9.B.18.2.1
TC Rep_1069_c_0 Rep_1069_c_0_68 79765 81324 + 2.A.66.4.5
peptidase Rep_1069_c_0 Rep_1069_c_0_69 81456 82685 + C40.007
pfam Rep_1069_c_0 Rep_1069_c_0_70 83001 85145 + GHL10 | CW_binding_2 | CW_binding_2 | CW_binding_2
TC Rep_1069_c_0 Rep_1069_c_0_71 85235 86584 + 2.A.25.1.3
Gene ID: Rep_1069_c_0_60
Type: TC
Location: 71619 - 72281 (+)
Gene ID: Rep_1069_c_0_61
Type: CAZyme
Location: 72296 - 73075 (+)
Gene ID: Rep_1069_c_0_62
Type: CAZyme
Location: 73115 - 73927 (+)
Gene ID: Rep_1069_c_0_63
Type: pfam
Location: 73937 - 75124 (+)
Gene ID: Rep_1069_c_0_64
Type:
Location: 75147 - 76268 (+)
Gene ID: Rep_1069_c_0_65
Type: CAZyme
Location: 76281 - 77045 (+)
Gene ID: Rep_1069_c_0_66
Type: CAZyme
Location: 77107 - 78207 (+)
Gene ID: Rep_1069_c_0_67
Type: TC
Location: 78308 - 79753 (+)
Gene ID: Rep_1069_c_0_68
Type: TC
Location: 79765 - 81324 (+)
Gene ID: Rep_1069_c_0_69
Type: peptidase
Location: 81456 - 82685 (+)
Gene ID: Rep_1069_c_0_70
Type: pfam
Location: 83001 - 85145 (+)
Gene ID: Rep_1069_c_0_71
Type: TC
Location: 85235 - 86584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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