Cluster: Rep_1056_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1056
- CGC Family ID: CGCFAM_00947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1056_c_169 | Rep_1056_c_169_2 | 312 | 974 | - | 3.A.1.24.5 |
| TC | Rep_1056_c_169 | Rep_1056_c_169_3 | 961 | 2001 | - | 3.A.1.24.4 |
| TC | Rep_1056_c_169 | Rep_1056_c_169_4 | 2289 | 4343 | + | 9.B.97.5.1 |
| CAZyme | Rep_1056_c_169 | Rep_1056_c_169_5 | 4526 | 5089 | + | GT2 |
Gene ID: Rep_1056_c_169_2
Type: TC
Location: 312 - 974 (-)
Type: TC
Location: 312 - 974 (-)
Gene ID: Rep_1056_c_169_3
Type: TC
Location: 961 - 2001 (-)
Type: TC
Location: 961 - 2001 (-)
Gene ID: Rep_1056_c_169_4
Type: TC
Location: 2289 - 4343 (+)
Type: TC
Location: 2289 - 4343 (+)
Gene ID: Rep_1056_c_169_5
Type: CAZyme
Location: 4526 - 5089 (+)
Type: CAZyme
Location: 4526 - 5089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Brevibacteriaceae
Genus
Brevibacterium
Species
Brevibacterium sp902489185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.