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Cluster: Rep_1056_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1056_c_12 Rep_1056_c_12_6 2556 3572 - 3.A.1.5.37
TC Rep_1056_c_12 Rep_1056_c_12_7 3556 4566 - 3.A.1.5.37
TC Rep_1056_c_12 Rep_1056_c_12_8 4570 5517 - 3.A.1.5.35
TC Rep_1056_c_12 Rep_1056_c_12_9 5510 6436 - 3.A.1.5.35
TC Rep_1056_c_12 Rep_1056_c_12_10 6533 8212 - 3.A.1.5.35
sulfatase Rep_1056_c_12 Rep_1056_c_12_11 8478 10388 + S1_97
CAZyme Rep_1056_c_12 Rep_1056_c_12_12 10385 11803 + CE14
Gene ID: Rep_1056_c_12_6
Type: TC
Location: 2556 - 3572 (-)
Gene ID: Rep_1056_c_12_7
Type: TC
Location: 3556 - 4566 (-)
Gene ID: Rep_1056_c_12_8
Type: TC
Location: 4570 - 5517 (-)
Gene ID: Rep_1056_c_12_9
Type: TC
Location: 5510 - 6436 (-)
Gene ID: Rep_1056_c_12_10
Type: TC
Location: 6533 - 8212 (-)
Gene ID: Rep_1056_c_12_11
Type: sulfatase
Location: 8478 - 10388 (+)
Gene ID: Rep_1056_c_12_12
Type: CAZyme
Location: 10385 - 11803 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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