Cluster: Rep_1056_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1056
- CGC Family ID: CGCFAM_06243
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1056_c_10 | Rep_1056_c_10_13 | 13959 | 15134 | + | GT4 |
| NULL(UNKNOWN) | Rep_1056_c_10 | Rep_1056_c_10_14 | 15131 | 15745 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1056_c_10 | Rep_1056_c_10_15 | 15742 | 16437 | - | 3.A.1.26.7 |
| TC | Rep_1056_c_10 | Rep_1056_c_10_16 | 16434 | 17042 | - | 2.A.88.1.8 |
Gene ID: Rep_1056_c_10_13
Type: CAZyme
Location: 13959 - 15134 (+)
Type: CAZyme
Location: 13959 - 15134 (+)
Gene ID: Rep_1056_c_10_14
Type:
Location: 15131 - 15745 (-)
Type:
Location: 15131 - 15745 (-)
Gene ID: Rep_1056_c_10_15
Type: TC
Location: 15742 - 16437 (-)
Type: TC
Location: 15742 - 16437 (-)
Gene ID: Rep_1056_c_10_16
Type: TC
Location: 16434 - 17042 (-)
Type: TC
Location: 16434 - 17042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Brevibacteriaceae
Genus
Brevibacterium
Species
Brevibacterium sp902489185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.