Cluster: Rep_1056_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1056
- CGC Family ID: CGCFAM_00105
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1056_c_5 | Rep_1056_c_5_18 | 15998 | 17074 | - | GT2 |
| TC | Rep_1056_c_5 | Rep_1056_c_5_19 | 17085 | 17888 | - | 3.A.1.103.4 |
| pfam | Rep_1056_c_5 | Rep_1056_c_5_20 | 17872 | 18720 | - | ABC2_membrane |
| STP | Rep_1056_c_5 | Rep_1056_c_5_21 | 18779 | 20014 | - | Pyr_redox_2 |
| TC | Rep_1056_c_5 | Rep_1056_c_5_22 | 20177 | 21730 | + | 2.A.25.1.2 |
Gene ID: Rep_1056_c_5_18
Type: CAZyme
Location: 15998 - 17074 (-)
Type: CAZyme
Location: 15998 - 17074 (-)
Gene ID: Rep_1056_c_5_19
Type: TC
Location: 17085 - 17888 (-)
Type: TC
Location: 17085 - 17888 (-)
Gene ID: Rep_1056_c_5_20
Type: pfam
Location: 17872 - 18720 (-)
Type: pfam
Location: 17872 - 18720 (-)
Gene ID: Rep_1056_c_5_21
Type: STP
Location: 18779 - 20014 (-)
Type: STP
Location: 18779 - 20014 (-)
Gene ID: Rep_1056_c_5_22
Type: TC
Location: 20177 - 21730 (+)
Type: TC
Location: 20177 - 21730 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Brevibacteriaceae
Genus
Brevibacterium
Species
Brevibacterium sp902489185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.