Cluster: Rep_1054_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1054
- CGC Family ID: CGCFAM_03851
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1054_c_23 | Rep_1054_c_23_12 | 9821 | 11173 | + | 2.A.3.1.16 |
| CAZyme | Rep_1054_c_23 | Rep_1054_c_23_13 | 11261 | 13438 | - | GH36 |
| CAZyme | Rep_1054_c_23 | Rep_1054_c_23_14 | 13553 | 14923 | - | GH13_31 |
Gene ID: Rep_1054_c_23_12
Type: TC
Location: 9821 - 11173 (+)
Type: TC
Location: 9821 - 11173 (+)
Gene ID: Rep_1054_c_23_13
Type: CAZyme
Location: 11261 - 13438 (-)
Type: CAZyme
Location: 11261 - 13438 (-)
Gene ID: Rep_1054_c_23_14
Type: CAZyme
Location: 13553 - 14923 (-)
Type: CAZyme
Location: 13553 - 14923 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Loigolactobacillus
Species
Loigolactobacillus coryniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.