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Cluster: Rep_1027_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1027_c_2 Rep_1027_c_2_11 9490 10551 - GH170
pfam Rep_1027_c_2 Rep_1027_c_2_12 10979 11992 + tRNA-synt_2 | AsnA
TC Rep_1027_c_2 Rep_1027_c_2_13 12055 13446 - 2.A.3.8.9
peptidase Rep_1027_c_2 Rep_1027_c_2_14 13464 14192 - C26.UPW
TC Rep_1027_c_2 Rep_1027_c_2_15 14410 15996 + 3.A.1.112.8
TC Rep_1027_c_2 Rep_1027_c_2_16 15993 17576 + 3.A.1.201.23
TC Rep_1027_c_2 Rep_1027_c_2_17 17617 18990 - 2.A.3.1.15
TC Rep_1027_c_2 Rep_1027_c_2_18 19021 20322 - 2.A.3.1.16
NULL(UNKNOWN) Rep_1027_c_2 Rep_1027_c_2_19 20466 21212 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_1027_c_2 Rep_1027_c_2_20 21289 21921 - S26.UPA
TC Rep_1027_c_2 Rep_1027_c_2_21 22040 24172 - 3.A.9.1.2
pfam Rep_1027_c_2 Rep_1027_c_2_22 24487 25383 - DUF915
TC Rep_1027_c_2 Rep_1027_c_2_23 25364 26674 - 4.A.3.2.9
TC Rep_1027_c_2 Rep_1027_c_2_24 26762 27463 + 3.A.1.122.14
Gene ID: Rep_1027_c_2_11
Type: CAZyme
Location: 9490 - 10551 (-)
Gene ID: Rep_1027_c_2_12
Type: pfam
Location: 10979 - 11992 (+)
Gene ID: Rep_1027_c_2_13
Type: TC
Location: 12055 - 13446 (-)
Gene ID: Rep_1027_c_2_14
Type: peptidase
Location: 13464 - 14192 (-)
Gene ID: Rep_1027_c_2_15
Type: TC
Location: 14410 - 15996 (+)
Gene ID: Rep_1027_c_2_16
Type: TC
Location: 15993 - 17576 (+)
Gene ID: Rep_1027_c_2_17
Type: TC
Location: 17617 - 18990 (-)
Gene ID: Rep_1027_c_2_18
Type: TC
Location: 19021 - 20322 (-)
Gene ID: Rep_1027_c_2_19
Type:
Location: 20466 - 21212 (-)
Gene ID: Rep_1027_c_2_20
Type: peptidase
Location: 21289 - 21921 (-)
Gene ID: Rep_1027_c_2_21
Type: TC
Location: 22040 - 24172 (-)
Gene ID: Rep_1027_c_2_22
Type: pfam
Location: 24487 - 25383 (-)
Gene ID: Rep_1027_c_2_23
Type: TC
Location: 25364 - 26674 (-)
Gene ID: Rep_1027_c_2_24
Type: TC
Location: 26762 - 27463 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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