Cluster: Rep_1027_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1027
- CGC Family ID: CGCFAM_00728
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1027_c_26 | Rep_1027_c_26_2 | 377 | 1246 | - | 3.A.1.1.39 |
| TC | Rep_1027_c_26 | Rep_1027_c_26_3 | 1246 | 2136 | - | 3.A.1.1.34 |
| STP | Rep_1027_c_26 | Rep_1027_c_26_4 | 2209 | 3531 | - | SBP_bac_1 |
| CAZyme | Rep_1027_c_26 | Rep_1027_c_26_5 | 3780 | 4724 | + | CE7 |
| CAZyme | Rep_1027_c_26 | Rep_1027_c_26_6 | 4717 | 6942 | + | GH36 |
| TC | Rep_1027_c_26 | Rep_1027_c_26_7 | 6963 | 8075 | + | 3.A.1.1.20 |
| TC | Rep_1027_c_26 | Rep_1027_c_26_8 | 8145 | 9554 | - | 2.A.1.3.30 |
Gene ID: Rep_1027_c_26_2
Type: TC
Location: 377 - 1246 (-)
Type: TC
Location: 377 - 1246 (-)
Gene ID: Rep_1027_c_26_3
Type: TC
Location: 1246 - 2136 (-)
Type: TC
Location: 1246 - 2136 (-)
Gene ID: Rep_1027_c_26_4
Type: STP
Location: 2209 - 3531 (-)
Type: STP
Location: 2209 - 3531 (-)
Gene ID: Rep_1027_c_26_5
Type: CAZyme
Location: 3780 - 4724 (+)
Type: CAZyme
Location: 3780 - 4724 (+)
Gene ID: Rep_1027_c_26_6
Type: CAZyme
Location: 4717 - 6942 (+)
Type: CAZyme
Location: 4717 - 6942 (+)
Gene ID: Rep_1027_c_26_7
Type: TC
Location: 6963 - 8075 (+)
Type: TC
Location: 6963 - 8075 (+)
Gene ID: Rep_1027_c_26_8
Type: TC
Location: 8145 - 9554 (-)
Type: TC
Location: 8145 - 9554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus sp902491705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.