Cluster: Rep_1027_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1027
- CGC Family ID: CGCFAM_01025
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1027_c_11 | Rep_1027_c_11_11 | 12285 | 14990 | + | 3.A.3.2.28 |
| pfam | Rep_1027_c_11 | Rep_1027_c_11_12 | 15081 | 16232 | + | Glyphos_transf |
| TC | Rep_1027_c_11 | Rep_1027_c_11_13 | 16234 | 17670 | + | 2.A.66.2.16 |
| CAZyme | Rep_1027_c_11 | Rep_1027_c_11_14 | 17667 | 18365 | + | GT32 |
| pfam | Rep_1027_c_11 | Rep_1027_c_11_15 | 18362 | 18817 | + | SprT-like | Zn_ribbon_SprT |
| CAZyme | Rep_1027_c_11 | Rep_1027_c_11_16 | 19071 | 19718 | + | GH73 |
Gene ID: Rep_1027_c_11_11
Type: TC
Location: 12285 - 14990 (+)
Type: TC
Location: 12285 - 14990 (+)
Gene ID: Rep_1027_c_11_12
Type: pfam
Location: 15081 - 16232 (+)
Type: pfam
Location: 15081 - 16232 (+)
Gene ID: Rep_1027_c_11_13
Type: TC
Location: 16234 - 17670 (+)
Type: TC
Location: 16234 - 17670 (+)
Gene ID: Rep_1027_c_11_14
Type: CAZyme
Location: 17667 - 18365 (+)
Type: CAZyme
Location: 17667 - 18365 (+)
Gene ID: Rep_1027_c_11_15
Type: pfam
Location: 18362 - 18817 (+)
Type: pfam
Location: 18362 - 18817 (+)
Gene ID: Rep_1027_c_11_16
Type: CAZyme
Location: 19071 - 19718 (+)
Type: CAZyme
Location: 19071 - 19718 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus sp902491705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.