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Cluster: Rep_1019_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1019_c_9 Rep_1019_c_9_15 12427 13860 - 2.A.66.2.16
CAZyme Rep_1019_c_9 Rep_1019_c_9_16 13880 15016 - GT4
CAZyme Rep_1019_c_9 Rep_1019_c_9_17 15044 16093 - GT113
pfam Rep_1019_c_9 Rep_1019_c_9_18 16093 17025 - LicD
STP Rep_1019_c_9 Rep_1019_c_9_19 17037 18146 - Pyr_redox
CAZyme Rep_1019_c_9 Rep_1019_c_9_20 18167 18943 - GT111
TC Rep_1019_c_9 Rep_1019_c_9_21 18960 19613 - 9.B.18.1.2
pfam Rep_1019_c_9 Rep_1019_c_9_22 19825 20805 - LytR_cpsA_psr
CAZyme Rep_1019_c_9 Rep_1019_c_9_23 21302 24760 - GH68_1
Gene ID: Rep_1019_c_9_15
Type: TC
Location: 12427 - 13860 (-)
Gene ID: Rep_1019_c_9_16
Type: CAZyme
Location: 13880 - 15016 (-)
Gene ID: Rep_1019_c_9_17
Type: CAZyme
Location: 15044 - 16093 (-)
Gene ID: Rep_1019_c_9_18
Type: pfam
Location: 16093 - 17025 (-)
Gene ID: Rep_1019_c_9_19
Type: STP
Location: 17037 - 18146 (-)
Gene ID: Rep_1019_c_9_20
Type: CAZyme
Location: 18167 - 18943 (-)
Gene ID: Rep_1019_c_9_21
Type: TC
Location: 18960 - 19613 (-)
Gene ID: Rep_1019_c_9_22
Type: pfam
Location: 19825 - 20805 (-)
Gene ID: Rep_1019_c_9_23
Type: CAZyme
Location: 21302 - 24760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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