dbCAN Logo

Cluster: Rep_1019_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1019_c_5 Rep_1019_c_5_28 30669 31817 - CE9
NULL(UNKNOWN) Rep_1019_c_5 Rep_1019_c_5_29 31990 32478 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1019_c_5 Rep_1019_c_5_30 32468 33073 - 3.A.1.144.3
NULL(UNKNOWN) Rep_1019_c_5 Rep_1019_c_5_31 33108 33638 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1019_c_5 Rep_1019_c_5_32 33638 34453 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1019_c_5 Rep_1019_c_5_33 34916 37921 + GH31_18
TC Rep_1019_c_5 Rep_1019_c_5_34 38075 38812 - 3.A.1.1.27
TC Rep_1019_c_5 Rep_1019_c_5_35 38936 40294 - 3.A.1.1.27
TC Rep_1019_c_5 Rep_1019_c_5_36 40348 41565 - 3.A.1.1.27
TC Rep_1019_c_5 Rep_1019_c_5_37 41676 42782 - 3.A.1.1.20
pfam Rep_1019_c_5 Rep_1019_c_5_38 42793 43458 - Hydrolase | HAD_2
CAZyme Rep_1019_c_5 Rep_1019_c_5_39 43443 45719 - GH65
CAZyme Rep_1019_c_5 Rep_1019_c_5_40 45813 47516 - CBM34 | GH13_20
CAZyme Rep_1019_c_5 Rep_1019_c_5_41 47582 49237 - GH13_31
TF Rep_1019_c_5 Rep_1019_c_5_42 49356 50315 - LacI
CAZyme Rep_1019_c_5 Rep_1019_c_5_43 50464 52086 - GH13_31
peptidase Rep_1019_c_5 Rep_1019_c_5_44 52247 53113 - S09.UPW
TC Rep_1019_c_5 Rep_1019_c_5_45 53079 53873 - 9.B.141.1.2
TC Rep_1019_c_5 Rep_1019_c_5_46 53870 54979 - 9.B.141.1.3
Gene ID: Rep_1019_c_5_28
Type: CAZyme
Location: 30669 - 31817 (-)
Gene ID: Rep_1019_c_5_29
Type:
Location: 31990 - 32478 (-)
Gene ID: Rep_1019_c_5_30
Type: TC
Location: 32468 - 33073 (-)
Gene ID: Rep_1019_c_5_31
Type:
Location: 33108 - 33638 (-)
Gene ID: Rep_1019_c_5_32
Type:
Location: 33638 - 34453 (-)
Gene ID: Rep_1019_c_5_33
Type: CAZyme
Location: 34916 - 37921 (+)
Gene ID: Rep_1019_c_5_34
Type: TC
Location: 38075 - 38812 (-)
Gene ID: Rep_1019_c_5_35
Type: TC
Location: 38936 - 40294 (-)
Gene ID: Rep_1019_c_5_36
Type: TC
Location: 40348 - 41565 (-)
Gene ID: Rep_1019_c_5_37
Type: TC
Location: 41676 - 42782 (-)
Gene ID: Rep_1019_c_5_38
Type: pfam
Location: 42793 - 43458 (-)
Gene ID: Rep_1019_c_5_39
Type: CAZyme
Location: 43443 - 45719 (-)
Gene ID: Rep_1019_c_5_40
Type: CAZyme
Location: 45813 - 47516 (-)
Gene ID: Rep_1019_c_5_41
Type: CAZyme
Location: 47582 - 49237 (-)
Gene ID: Rep_1019_c_5_42
Type: TF
Location: 49356 - 50315 (-)
Gene ID: Rep_1019_c_5_43
Type: CAZyme
Location: 50464 - 52086 (-)
Gene ID: Rep_1019_c_5_44
Type: peptidase
Location: 52247 - 53113 (-)
Gene ID: Rep_1019_c_5_45
Type: TC
Location: 53079 - 53873 (-)
Gene ID: Rep_1019_c_5_46
Type: TC
Location: 53870 - 54979 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List