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Cluster: Rep_1019_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1019_c_0 Rep_1019_c_0_52 57296 58642 + 9.A.40.2.1
STP Rep_1019_c_0 Rep_1019_c_0_53 58751 59323 + Pribosyltran
TC Rep_1019_c_0 Rep_1019_c_0_54 59410 60702 - 2.A.3.8.12
CAZyme Rep_1019_c_0 Rep_1019_c_0_55 60809 61495 + GH25
TC Rep_1019_c_0 Rep_1019_c_0_56 61492 62748 + 1.I.1.1.3
TC Rep_1019_c_0 Rep_1019_c_0_57 62741 64060 + 4.A.3.2.4
pfam Rep_1019_c_0 Rep_1019_c_0_58 64514 65587 + PTS_EIIC_2
TC Rep_1019_c_0 Rep_1019_c_0_59 65818 67101 + 2.A.40.1.2
Gene ID: Rep_1019_c_0_52
Type: TC
Location: 57296 - 58642 (+)
Gene ID: Rep_1019_c_0_53
Type: STP
Location: 58751 - 59323 (+)
Gene ID: Rep_1019_c_0_54
Type: TC
Location: 59410 - 60702 (-)
Gene ID: Rep_1019_c_0_55
Type: CAZyme
Location: 60809 - 61495 (+)
Gene ID: Rep_1019_c_0_56
Type: TC
Location: 61492 - 62748 (+)
Gene ID: Rep_1019_c_0_57
Type: TC
Location: 62741 - 64060 (+)
Gene ID: Rep_1019_c_0_58
Type: pfam
Location: 64514 - 65587 (+)
Gene ID: Rep_1019_c_0_59
Type: TC
Location: 65818 - 67101 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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