Cluster: Rep_1015_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1015
- CGC Family ID: CGCFAM_10955
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1015_c_5 | Rep_1015_c_5_24 | 23414 | 24355 | + | GH23 |
| pfam | Rep_1015_c_5 | Rep_1015_c_5_25 | 24613 | 25902 | + | AAA_14 | DUF4143 |
| TC | Rep_1015_c_5 | Rep_1015_c_5_26 | 26011 | 26853 | + | 8.A.5.1.4 |
Gene ID: Rep_1015_c_5_24
Type: CAZyme
Location: 23414 - 24355 (+)
Type: CAZyme
Location: 23414 - 24355 (+)
Gene ID: Rep_1015_c_5_25
Type: pfam
Location: 24613 - 25902 (+)
Type: pfam
Location: 24613 - 25902 (+)
Gene ID: Rep_1015_c_5_26
Type: TC
Location: 26011 - 26853 (+)
Type: TC
Location: 26011 - 26853 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinatimonas
Species
Succinatimonas sp905203285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.