Cluster: Rep_1015_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1015_c_36 | Rep_1015_c_36_1 | 115 | 1194 | - | GT9 |
| peptidase | Rep_1015_c_36 | Rep_1015_c_36_2 | 1200 | 1838 | - | C82.A01 |
| TC | Rep_1015_c_36 | Rep_1015_c_36_3 | 2021 | 3250 | + | 2.A.1.71.2 |
| pfam | Rep_1015_c_36 | Rep_1015_c_36_4 | 3469 | 5784 | + | DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C |
| pfam | Rep_1015_c_36 | Rep_1015_c_36_5 | 5787 | 6542 | + | Acyltransferase |
| TC | Rep_1015_c_36 | Rep_1015_c_36_6 | 6564 | 7106 | - | 9.A.4.1.1 |
Gene ID: Rep_1015_c_36_1
Type: CAZyme
Location: 115 - 1194 (-)
Type: CAZyme
Location: 115 - 1194 (-)
Gene ID: Rep_1015_c_36_2
Type: peptidase
Location: 1200 - 1838 (-)
Type: peptidase
Location: 1200 - 1838 (-)
Gene ID: Rep_1015_c_36_3
Type: TC
Location: 2021 - 3250 (+)
Type: TC
Location: 2021 - 3250 (+)
Gene ID: Rep_1015_c_36_4
Type: pfam
Location: 3469 - 5784 (+)
Type: pfam
Location: 3469 - 5784 (+)
Gene ID: Rep_1015_c_36_5
Type: pfam
Location: 5787 - 6542 (+)
Type: pfam
Location: 5787 - 6542 (+)
Gene ID: Rep_1015_c_36_6
Type: TC
Location: 6564 - 7106 (-)
Type: TC
Location: 6564 - 7106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinatimonas
Species
Succinatimonas sp905203285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.