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Cluster: Rep_1015_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1015_c_18 Rep_1015_c_18_13 14353 17049 + GH106
NULL(UNKNOWN) Rep_1015_c_18 Rep_1015_c_18_14 17132 17677 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1015_c_18 Rep_1015_c_18_15 17698 18435 - 3.D.6.1.4
pfam Rep_1015_c_18 Rep_1015_c_18_16 18435 19070 - FMN_bind
TC Rep_1015_c_18 Rep_1015_c_18_17 19070 20167 - 3.D.6.1.4
TC Rep_1015_c_18 Rep_1015_c_18_18 20174 22255 - 3.D.6.1.4
TC Rep_1015_c_18 Rep_1015_c_18_19 22256 22825 - 3.D.6.1.1
TC Rep_1015_c_18 Rep_1015_c_18_20 22822 23409 - 3.D.6.1.4
Gene ID: Rep_1015_c_18_13
Type: CAZyme
Location: 14353 - 17049 (+)
Gene ID: Rep_1015_c_18_14
Type:
Location: 17132 - 17677 (-)
Gene ID: Rep_1015_c_18_15
Type: TC
Location: 17698 - 18435 (-)
Gene ID: Rep_1015_c_18_16
Type: pfam
Location: 18435 - 19070 (-)
Gene ID: Rep_1015_c_18_17
Type: TC
Location: 19070 - 20167 (-)
Gene ID: Rep_1015_c_18_18
Type: TC
Location: 20174 - 22255 (-)
Gene ID: Rep_1015_c_18_19
Type: TC
Location: 22256 - 22825 (-)
Gene ID: Rep_1015_c_18_20
Type: TC
Location: 22822 - 23409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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