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Cluster: Rep_1013_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1013_c_23 Rep_1013_c_23_7 6333 7355 + GH23
pfam Rep_1013_c_23 Rep_1013_c_23_8 7398 9488 - BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5
pfam Rep_1013_c_23 Rep_1013_c_23_9 9491 10255 - ZipA_C
TC Rep_1013_c_23 Rep_1013_c_23_10 10359 11123 + 2.A.121.1.1
TC Rep_1013_c_23 Rep_1013_c_23_11 11127 12788 + 8.A.7.1.4
TC Rep_1013_c_23 Rep_1013_c_23_12 12840 13364 + 4.A.3.2.5
TC Rep_1013_c_23 Rep_1013_c_23_13 13487 14869 - 3.D.2.1.1
TC Rep_1013_c_23 Rep_1013_c_23_14 14890 16419 - 3.D.2.1.1
Gene ID: Rep_1013_c_23_7
Type: CAZyme
Location: 6333 - 7355 (+)
Gene ID: Rep_1013_c_23_8
Type: pfam
Location: 7398 - 9488 (-)
Gene ID: Rep_1013_c_23_9
Type: pfam
Location: 9491 - 10255 (-)
Gene ID: Rep_1013_c_23_10
Type: TC
Location: 10359 - 11123 (+)
Gene ID: Rep_1013_c_23_11
Type: TC
Location: 11127 - 12788 (+)
Gene ID: Rep_1013_c_23_12
Type: TC
Location: 12840 - 13364 (+)
Gene ID: Rep_1013_c_23_13
Type: TC
Location: 13487 - 14869 (-)
Gene ID: Rep_1013_c_23_14
Type: TC
Location: 14890 - 16419 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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