Cluster: Rep_1013_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1013
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1013_c_9 | Rep_1013_c_9_8 | 9905 | 10987 | + | 9.B.146.1.6 |
| pfam | Rep_1013_c_9 | Rep_1013_c_9_9 | 11003 | 12346 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1013_c_9 | Rep_1013_c_9_10 | 12347 | 13483 | + | 2.A.103.1.1 |
| CAZyme | Rep_1013_c_9 | Rep_1013_c_9_11 | 13437 | 14543 | + | GT28 |
Gene ID: Rep_1013_c_9_8
Type: TC
Location: 9905 - 10987 (+)
Type: TC
Location: 9905 - 10987 (+)
Gene ID: Rep_1013_c_9_9
Type: pfam
Location: 11003 - 12346 (+)
Type: pfam
Location: 11003 - 12346 (+)
Gene ID: Rep_1013_c_9_10
Type: TC
Location: 12347 - 13483 (+)
Type: TC
Location: 12347 - 13483 (+)
Gene ID: Rep_1013_c_9_11
Type: CAZyme
Location: 13437 - 14543 (+)
Type: CAZyme
Location: 13437 - 14543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp905201175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.