Cluster: Rep_1013_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1013
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1013_c_32 | Rep_1013_c_32_14 | 12674 | 13693 | + | GT2 |
| pfam | Rep_1013_c_32 | Rep_1013_c_32_15 | 13734 | 14075 | + | GtrA_DPMS_TM |
| pfam | Rep_1013_c_32 | Rep_1013_c_32_16 | 14087 | 14872 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | Rep_1013_c_32 | Rep_1013_c_32_17 | 14908 | 15525 | + | 4.F.1.1.8 |
Gene ID: Rep_1013_c_32_14
Type: CAZyme
Location: 12674 - 13693 (+)
Type: CAZyme
Location: 12674 - 13693 (+)
Gene ID: Rep_1013_c_32_15
Type: pfam
Location: 13734 - 14075 (+)
Type: pfam
Location: 13734 - 14075 (+)
Gene ID: Rep_1013_c_32_16
Type: pfam
Location: 14087 - 14872 (+)
Type: pfam
Location: 14087 - 14872 (+)
Gene ID: Rep_1013_c_32_17
Type: TC
Location: 14908 - 15525 (+)
Type: TC
Location: 14908 - 15525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp905201175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.