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Cluster: Rep_1013_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1013_c_26 Rep_1013_c_26_7 7222 9417 + GH77
CAZyme Rep_1013_c_26 Rep_1013_c_26_8 9435 11828 + CBM48 | GH13_9
CAZyme Rep_1013_c_26 Rep_1013_c_26_9 11853 13988 + GH13_11
pfam Rep_1013_c_26 Rep_1013_c_26_10 14024 14788 - adh_short | KR | adh_short_C2
TC Rep_1013_c_26 Rep_1013_c_26_11 14808 16088 - 2.A.56.1.2
pfam Rep_1013_c_26 Rep_1013_c_26_12 16092 16595 - DctQ
TC Rep_1013_c_26 Rep_1013_c_26_13 16606 17340 - 2.A.56.1.9
Gene ID: Rep_1013_c_26_7
Type: CAZyme
Location: 7222 - 9417 (+)
Gene ID: Rep_1013_c_26_8
Type: CAZyme
Location: 9435 - 11828 (+)
Gene ID: Rep_1013_c_26_9
Type: CAZyme
Location: 11853 - 13988 (+)
Gene ID: Rep_1013_c_26_10
Type: pfam
Location: 14024 - 14788 (-)
Gene ID: Rep_1013_c_26_11
Type: TC
Location: 14808 - 16088 (-)
Gene ID: Rep_1013_c_26_12
Type: pfam
Location: 16092 - 16595 (-)
Gene ID: Rep_1013_c_26_13
Type: TC
Location: 16606 - 17340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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