dbCAN Logo

Cluster: Rep_1009_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1009_c_0 Rep_1009_c_0_1377 1539476 1542079 + GT51
TF Rep_1009_c_0 Rep_1009_c_0_1378 1542179 1543225 - HTH_3
NULL(UNKNOWN) Rep_1009_c_0 Rep_1009_c_0_1379 1543242 1543532 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1009_c_0 Rep_1009_c_0_1380 1543966 1544739 + 2.A.56.1.3
NULL(UNKNOWN) Rep_1009_c_0 Rep_1009_c_0_1381 1544768 1544944 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1009_c_0 Rep_1009_c_0_1382 1545012 1545518 + 2.A.56.1.5
TC Rep_1009_c_0 Rep_1009_c_0_1383 1545520 1546833 + 2.A.56.1.5
Gene ID: Rep_1009_c_0_1377
Type: CAZyme
Location: 1539476 - 1542079 (+)
Gene ID: Rep_1009_c_0_1378
Type: TF
Location: 1542179 - 1543225 (-)
Gene ID: Rep_1009_c_0_1379
Type:
Location: 1543242 - 1543532 (-)
Gene ID: Rep_1009_c_0_1380
Type: TC
Location: 1543966 - 1544739 (+)
Gene ID: Rep_1009_c_0_1381
Type:
Location: 1544768 - 1544944 (+)
Gene ID: Rep_1009_c_0_1382
Type: TC
Location: 1545012 - 1545518 (+)
Gene ID: Rep_1009_c_0_1383
Type: TC
Location: 1545520 - 1546833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List