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Cluster: Rep_1009_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1009_c_0 Rep_1009_c_0_733 845774 848449 + 4.C.1.1.7
STP Rep_1009_c_0 Rep_1009_c_0_734 848753 849868 + Diacid_rec
pfam Rep_1009_c_0 Rep_1009_c_0_735 849946 850776 - Hexapep | SATase_N
TC Rep_1009_c_0 Rep_1009_c_0_736 851055 852038 - 2.A.4.7.5
pfam Rep_1009_c_0 Rep_1009_c_0_737 852397 854847 + Acyltransferase | GPAT_C
pfam Rep_1009_c_0 Rep_1009_c_0_738 854868 855320 + FliL
TC Rep_1009_c_0 Rep_1009_c_0_739 855460 856317 - 9.B.104.1.3
pfam Rep_1009_c_0 Rep_1009_c_0_740 856299 857261 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd
CAZyme Rep_1009_c_0 Rep_1009_c_0_741 857394 858431 + GT9
CAZyme Rep_1009_c_0 Rep_1009_c_0_742 858421 859695 + GT30
Gene ID: Rep_1009_c_0_733
Type: TC
Location: 845774 - 848449 (+)
Gene ID: Rep_1009_c_0_734
Type: STP
Location: 848753 - 849868 (+)
Gene ID: Rep_1009_c_0_735
Type: pfam
Location: 849946 - 850776 (-)
Gene ID: Rep_1009_c_0_736
Type: TC
Location: 851055 - 852038 (-)
Gene ID: Rep_1009_c_0_737
Type: pfam
Location: 852397 - 854847 (+)
Gene ID: Rep_1009_c_0_738
Type: pfam
Location: 854868 - 855320 (+)
Gene ID: Rep_1009_c_0_739
Type: TC
Location: 855460 - 856317 (-)
Gene ID: Rep_1009_c_0_740
Type: pfam
Location: 856299 - 857261 (-)
Gene ID: Rep_1009_c_0_741
Type: CAZyme
Location: 857394 - 858431 (+)
Gene ID: Rep_1009_c_0_742
Type: CAZyme
Location: 858421 - 859695 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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