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Cluster: Rep_1009_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1009_c_0 Rep_1009_c_0_603 696375 697676 - 2.A.56.1.5
pfam Rep_1009_c_0 Rep_1009_c_0_604 697684 698199 - DctQ
TC Rep_1009_c_0 Rep_1009_c_0_605 698485 699471 - 2.A.56.1.5
CAZyme Rep_1009_c_0 Rep_1009_c_0_606 699875 701332 + GT5
pfam Rep_1009_c_0 Rep_1009_c_0_607 701582 702619 + Radical_SAM | BATS
TC Rep_1009_c_0 Rep_1009_c_0_608 702845 703582 + 3.A.1.3.16
TC Rep_1009_c_0 Rep_1009_c_0_609 703615 704454 + 3.A.1.3.16
TC Rep_1009_c_0 Rep_1009_c_0_610 704512 705198 + 3.A.1.3.16
TC Rep_1009_c_0 Rep_1009_c_0_611 705211 705960 + 3.A.1.3.18
Gene ID: Rep_1009_c_0_603
Type: TC
Location: 696375 - 697676 (-)
Gene ID: Rep_1009_c_0_604
Type: pfam
Location: 697684 - 698199 (-)
Gene ID: Rep_1009_c_0_605
Type: TC
Location: 698485 - 699471 (-)
Gene ID: Rep_1009_c_0_606
Type: CAZyme
Location: 699875 - 701332 (+)
Gene ID: Rep_1009_c_0_607
Type: pfam
Location: 701582 - 702619 (+)
Gene ID: Rep_1009_c_0_608
Type: TC
Location: 702845 - 703582 (+)
Gene ID: Rep_1009_c_0_609
Type: TC
Location: 703615 - 704454 (+)
Gene ID: Rep_1009_c_0_610
Type: TC
Location: 704512 - 705198 (+)
Gene ID: Rep_1009_c_0_611
Type: TC
Location: 705211 - 705960 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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