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Cluster: Rep_1009_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1009_c_0 Rep_1009_c_0_1970 2243316 2244260 + 8.A.21.2.1
peptidase Rep_1009_c_0 Rep_1009_c_0_1971 2244489 2246435 + S49.UPA
NULL(UNKNOWN) Rep_1009_c_0 Rep_1009_c_0_1972 2246546 2247922 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1009_c_0 Rep_1009_c_0_1973 2248091 2249830 + 3.A.7.11.1
NULL(UNKNOWN) Rep_1009_c_0 Rep_1009_c_0_1974 2249834 2250376 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1009_c_0 Rep_1009_c_0_1975 2250557 2250895 - P-II
TC Rep_1009_c_0 Rep_1009_c_0_1976 2250924 2252231 - 1.A.11.1.1
TC Rep_1009_c_0 Rep_1009_c_0_1977 2252486 2253883 + 2.A.66.1.2
CAZyme Rep_1009_c_0 Rep_1009_c_0_1978 2253929 2255737 + GH13_31
TC Rep_1009_c_0 Rep_1009_c_0_1979 2256048 2257688 - 1.B.52.2.1
TC Rep_1009_c_0 Rep_1009_c_0_1980 2258119 2259762 - 1.B.52.2.1
TC Rep_1009_c_0 Rep_1009_c_0_1981 2260392 2261279 - 3.A.1.2.5
TC Rep_1009_c_0 Rep_1009_c_0_1982 2261935 2262987 - 3.A.1.2.24
Gene ID: Rep_1009_c_0_1970
Type: TC
Location: 2243316 - 2244260 (+)
Gene ID: Rep_1009_c_0_1971
Type: peptidase
Location: 2244489 - 2246435 (+)
Gene ID: Rep_1009_c_0_1972
Type:
Location: 2246546 - 2247922 (-)
Gene ID: Rep_1009_c_0_1973
Type: TC
Location: 2248091 - 2249830 (+)
Gene ID: Rep_1009_c_0_1974
Type:
Location: 2249834 - 2250376 (+)
Gene ID: Rep_1009_c_0_1975
Type: pfam
Location: 2250557 - 2250895 (-)
Gene ID: Rep_1009_c_0_1976
Type: TC
Location: 2250924 - 2252231 (-)
Gene ID: Rep_1009_c_0_1977
Type: TC
Location: 2252486 - 2253883 (+)
Gene ID: Rep_1009_c_0_1978
Type: CAZyme
Location: 2253929 - 2255737 (+)
Gene ID: Rep_1009_c_0_1979
Type: TC
Location: 2256048 - 2257688 (-)
Gene ID: Rep_1009_c_0_1980
Type: TC
Location: 2258119 - 2259762 (-)
Gene ID: Rep_1009_c_0_1981
Type: TC
Location: 2260392 - 2261279 (-)
Gene ID: Rep_1009_c_0_1982
Type: TC
Location: 2261935 - 2262987 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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