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Cluster: Rep_1008_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1008_c_0 Rep_1008_c_0_2136 2117511 2118530 - 2.A.4.7.5
pfam Rep_1008_c_0 Rep_1008_c_0_2137 2118904 2121348 + Acyltransferase | GPAT_C
pfam Rep_1008_c_0 Rep_1008_c_0_2138 2121367 2121819 + FliL
TC Rep_1008_c_0 Rep_1008_c_0_2139 2121884 2122741 - 9.B.104.1.2
pfam Rep_1008_c_0 Rep_1008_c_0_2140 2122723 2123685 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd
CAZyme Rep_1008_c_0 Rep_1008_c_0_2141 2123878 2124906 + GT9
CAZyme Rep_1008_c_0 Rep_1008_c_0_2142 2124906 2126201 + GT30
Gene ID: Rep_1008_c_0_2136
Type: TC
Location: 2117511 - 2118530 (-)
Gene ID: Rep_1008_c_0_2137
Type: pfam
Location: 2118904 - 2121348 (+)
Gene ID: Rep_1008_c_0_2138
Type: pfam
Location: 2121367 - 2121819 (+)
Gene ID: Rep_1008_c_0_2139
Type: TC
Location: 2121884 - 2122741 (-)
Gene ID: Rep_1008_c_0_2140
Type: pfam
Location: 2122723 - 2123685 (-)
Gene ID: Rep_1008_c_0_2141
Type: CAZyme
Location: 2123878 - 2124906 (+)
Gene ID: Rep_1008_c_0_2142
Type: CAZyme
Location: 2124906 - 2126201 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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