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Cluster: Rep_1008_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1008_c_0 Rep_1008_c_0_2001 1962650 1963951 - 2.A.56.1.5
pfam Rep_1008_c_0 Rep_1008_c_0_2002 1963958 1964461 - DctQ
STP Rep_1008_c_0 Rep_1008_c_0_2003 1964570 1964902 - DctP
TC Rep_1008_c_0 Rep_1008_c_0_2004 1964899 1965558 - 2.A.56.1.5
CAZyme Rep_1008_c_0 Rep_1008_c_0_2005 1965986 1967443 + GT5
pfam Rep_1008_c_0 Rep_1008_c_0_2006 1967523 1968701 - Transposase_31
pfam Rep_1008_c_0 Rep_1008_c_0_2007 1969025 1970002 + Radical_SAM | BATS
TC Rep_1008_c_0 Rep_1008_c_0_2008 1970190 1970927 + 3.A.1.3.16
TC Rep_1008_c_0 Rep_1008_c_0_2009 1970971 1971810 + 3.A.1.3.16
TC Rep_1008_c_0 Rep_1008_c_0_2010 1971880 1972566 + 3.A.1.3.16
TC Rep_1008_c_0 Rep_1008_c_0_2011 1972579 1973328 + 3.A.1.3.18
Gene ID: Rep_1008_c_0_2001
Type: TC
Location: 1962650 - 1963951 (-)
Gene ID: Rep_1008_c_0_2002
Type: pfam
Location: 1963958 - 1964461 (-)
Gene ID: Rep_1008_c_0_2003
Type: STP
Location: 1964570 - 1964902 (-)
Gene ID: Rep_1008_c_0_2004
Type: TC
Location: 1964899 - 1965558 (-)
Gene ID: Rep_1008_c_0_2005
Type: CAZyme
Location: 1965986 - 1967443 (+)
Gene ID: Rep_1008_c_0_2006
Type: pfam
Location: 1967523 - 1968701 (-)
Gene ID: Rep_1008_c_0_2007
Type: pfam
Location: 1969025 - 1970002 (+)
Gene ID: Rep_1008_c_0_2008
Type: TC
Location: 1970190 - 1970927 (+)
Gene ID: Rep_1008_c_0_2009
Type: TC
Location: 1970971 - 1971810 (+)
Gene ID: Rep_1008_c_0_2010
Type: TC
Location: 1971880 - 1972566 (+)
Gene ID: Rep_1008_c_0_2011
Type: TC
Location: 1972579 - 1973328 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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