Cluster: Rep_1008_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1008
- CGC Family ID: CGCFAM_10552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1008_c_0 | Rep_1008_c_0_65 | 74585 | 75676 | - | GH177 |
| TC | Rep_1008_c_0 | Rep_1008_c_0_66 | 75750 | 76511 | - | 3.A.1.3.17 |
| pfam | Rep_1008_c_0 | Rep_1008_c_0_67 | 76615 | 77166 | + | Acetyltransf_1 |
| TC | Rep_1008_c_0 | Rep_1008_c_0_68 | 77203 | 78867 | - | 3.A.1.120.6 |
| pfam | Rep_1008_c_0 | Rep_1008_c_0_69 | 78966 | 79913 | - | Flagellin_N | Flagellin_C |
| TC | Rep_1008_c_0 | Rep_1008_c_0_70 | 80099 | 81304 | - | 1.B.52.2.1 |
Gene ID: Rep_1008_c_0_65
Type: CAZyme
Location: 74585 - 75676 (-)
Type: CAZyme
Location: 74585 - 75676 (-)
Gene ID: Rep_1008_c_0_66
Type: TC
Location: 75750 - 76511 (-)
Type: TC
Location: 75750 - 76511 (-)
Gene ID: Rep_1008_c_0_67
Type: pfam
Location: 76615 - 77166 (+)
Type: pfam
Location: 76615 - 77166 (+)
Gene ID: Rep_1008_c_0_68
Type: TC
Location: 77203 - 78867 (-)
Type: TC
Location: 77203 - 78867 (-)
Gene ID: Rep_1008_c_0_69
Type: pfam
Location: 78966 - 79913 (-)
Type: pfam
Location: 78966 - 79913 (-)
Gene ID: Rep_1008_c_0_70
Type: TC
Location: 80099 - 81304 (-)
Type: TC
Location: 80099 - 81304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp902465145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.