Cluster: Rep_1004_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1004_c_12 | Rep_1004_c_12_157 | 176612 | 178129 | + | GH23 |
| pfam | Rep_1004_c_12 | Rep_1004_c_12_158 | 178130 | 178636 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_1004_c_12 | Rep_1004_c_12_159 | 178754 | 179818 | + | 9.B.8.3.4 |
| pfam | Rep_1004_c_12 | Rep_1004_c_12_160 | 179854 | 180510 | - | HAD |
| TC | Rep_1004_c_12 | Rep_1004_c_12_161 | 180514 | 181881 | - | 4.A.1.2.7 |
Gene ID: Rep_1004_c_12_157
Type: CAZyme
Location: 176612 - 178129 (+)
Type: CAZyme
Location: 176612 - 178129 (+)
Gene ID: Rep_1004_c_12_158
Type: pfam
Location: 178130 - 178636 (-)
Type: pfam
Location: 178130 - 178636 (-)
Gene ID: Rep_1004_c_12_159
Type: TC
Location: 178754 - 179818 (+)
Type: TC
Location: 178754 - 179818 (+)
Gene ID: Rep_1004_c_12_160
Type: pfam
Location: 179854 - 180510 (-)
Type: pfam
Location: 179854 - 180510 (-)
Gene ID: Rep_1004_c_12_161
Type: TC
Location: 180514 - 181881 (-)
Type: TC
Location: 180514 - 181881 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.