Cluster: Rep_1004_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_11 | Rep_1004_c_11_166 | 186600 | 187838 | - | 2.A.1.15.9 |
| pfam | Rep_1004_c_11 | Rep_1004_c_11_167 | 188011 | 188343 | + | DUF446 |
| peptidase | Rep_1004_c_11 | Rep_1004_c_11_168 | 188490 | 194465 | + | I39.UPW |
| CAZyme | Rep_1004_c_11 | Rep_1004_c_11_169 | 194515 | 196863 | + | GT51 |
Gene ID: Rep_1004_c_11_166
Type: TC
Location: 186600 - 187838 (-)
Type: TC
Location: 186600 - 187838 (-)
Gene ID: Rep_1004_c_11_167
Type: pfam
Location: 188011 - 188343 (+)
Type: pfam
Location: 188011 - 188343 (+)
Gene ID: Rep_1004_c_11_168
Type: peptidase
Location: 188490 - 194465 (+)
Type: peptidase
Location: 188490 - 194465 (+)
Gene ID: Rep_1004_c_11_169
Type: CAZyme
Location: 194515 - 196863 (+)
Type: CAZyme
Location: 194515 - 196863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.