Cluster: Rep_1004_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_11 | Rep_1004_c_11_151 | 169814 | 171664 | + | 3.A.7.16.1 |
| pfam | Rep_1004_c_11 | Rep_1004_c_11_152 | 171702 | 173027 | - | Acetyltransf_1 | AA_kinase | Acetyltransf_7 |
| pfam | Rep_1004_c_11 | Rep_1004_c_11_153 | 173267 | 174520 | + | Amidase_3 | AMIN |
| CAZyme | Rep_1004_c_11 | Rep_1004_c_11_154 | 175180 | 176316 | + | GH102 |
Gene ID: Rep_1004_c_11_151
Type: TC
Location: 169814 - 171664 (+)
Type: TC
Location: 169814 - 171664 (+)
Gene ID: Rep_1004_c_11_152
Type: pfam
Location: 171702 - 173027 (-)
Type: pfam
Location: 171702 - 173027 (-)
Gene ID: Rep_1004_c_11_153
Type: pfam
Location: 173267 - 174520 (+)
Type: pfam
Location: 173267 - 174520 (+)
Gene ID: Rep_1004_c_11_154
Type: CAZyme
Location: 175180 - 176316 (+)
Type: CAZyme
Location: 175180 - 176316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.