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Cluster: Rep_1004_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1004_c_11 Rep_1004_c_11_84 89204 90463 + GH75
TC Rep_1004_c_11 Rep_1004_c_11_85 90522 91091 - 9.B.36.1.1
CAZyme Rep_1004_c_11 Rep_1004_c_11_86 91277 91993 + CBM50
TF Rep_1004_c_11 Rep_1004_c_11_87 92028 92885 - HTH_AraC | HTH_AraC
TC Rep_1004_c_11 Rep_1004_c_11_88 93064 94836 + 3.A.1.210.9
STP Rep_1004_c_11 Rep_1004_c_11_89 94846 95442 - TetR_N
TC Rep_1004_c_11 Rep_1004_c_11_90 95601 97145 + 2.A.15.1.3
NULL(UNKNOWN) Rep_1004_c_11 Rep_1004_c_11_91 97152 97583 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1004_c_11 Rep_1004_c_11_92 98238 99503 + 2.A.1.45.1
pfam Rep_1004_c_11 Rep_1004_c_11_93 99540 100349 + MoaF | MoaF_C
sulfatase Rep_1004_c_11 Rep_1004_c_11_94 100351 101490 - S1_6
TC Rep_1004_c_11 Rep_1004_c_11_95 101533 103116 - 2.A.14.2.1
Gene ID: Rep_1004_c_11_84
Type: CAZyme
Location: 89204 - 90463 (+)
Gene ID: Rep_1004_c_11_85
Type: TC
Location: 90522 - 91091 (-)
Gene ID: Rep_1004_c_11_86
Type: CAZyme
Location: 91277 - 91993 (+)
Gene ID: Rep_1004_c_11_87
Type: TF
Location: 92028 - 92885 (-)
Gene ID: Rep_1004_c_11_88
Type: TC
Location: 93064 - 94836 (+)
Gene ID: Rep_1004_c_11_89
Type: STP
Location: 94846 - 95442 (-)
Gene ID: Rep_1004_c_11_90
Type: TC
Location: 95601 - 97145 (+)
Gene ID: Rep_1004_c_11_91
Type:
Location: 97152 - 97583 (-)
Gene ID: Rep_1004_c_11_92
Type: TC
Location: 98238 - 99503 (+)
Gene ID: Rep_1004_c_11_93
Type: pfam
Location: 99540 - 100349 (+)
Gene ID: Rep_1004_c_11_94
Type: sulfatase
Location: 100351 - 101490 (-)
Gene ID: Rep_1004_c_11_95
Type: TC
Location: 101533 - 103116 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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