Cluster: Rep_1004_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1004_c_31 | Rep_1004_c_31_414 | 468919 | 469836 | + | CE11 |
| pfam | Rep_1004_c_31 | Rep_1004_c_31_415 | 469941 | 470456 | - | DciA |
| pfam | Rep_1004_c_31 | Rep_1004_c_31_416 | 470552 | 471013 | + | SecM |
| TC | Rep_1004_c_31 | Rep_1004_c_31_417 | 471075 | 473804 | + | 3.A.5.1.1 |
Gene ID: Rep_1004_c_31_414
Type: CAZyme
Location: 468919 - 469836 (+)
Type: CAZyme
Location: 468919 - 469836 (+)
Gene ID: Rep_1004_c_31_415
Type: pfam
Location: 469941 - 470456 (-)
Type: pfam
Location: 469941 - 470456 (-)
Gene ID: Rep_1004_c_31_416
Type: pfam
Location: 470552 - 471013 (+)
Type: pfam
Location: 470552 - 471013 (+)
Gene ID: Rep_1004_c_31_417
Type: TC
Location: 471075 - 473804 (+)
Type: TC
Location: 471075 - 473804 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.