Cluster: Rep_1004_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_31 | Rep_1004_c_31_151 | 167172 | 167696 | + | 2.A.37.1.2 |
| CAZyme | Rep_1004_c_31 | Rep_1004_c_31_152 | 167729 | 169393 | - | GH13_29 |
| TC | Rep_1004_c_31 | Rep_1004_c_31_153 | 169591 | 171006 | - | 4.A.1.2.4 |
| TF | Rep_1004_c_31 | Rep_1004_c_31_154 | 171136 | 172083 | - | LacI |
| TC | Rep_1004_c_31 | Rep_1004_c_31_155 | 172507 | 175215 | + | 3.A.3.4.1 |
| CAZyme | Rep_1004_c_31 | Rep_1004_c_31_156 | 175427 | 177817 | + | GH20 |
Gene ID: Rep_1004_c_31_151
Type: TC
Location: 167172 - 167696 (+)
Type: TC
Location: 167172 - 167696 (+)
Gene ID: Rep_1004_c_31_152
Type: CAZyme
Location: 167729 - 169393 (-)
Type: CAZyme
Location: 167729 - 169393 (-)
Gene ID: Rep_1004_c_31_153
Type: TC
Location: 169591 - 171006 (-)
Type: TC
Location: 169591 - 171006 (-)
Gene ID: Rep_1004_c_31_154
Type: TF
Location: 171136 - 172083 (-)
Type: TF
Location: 171136 - 172083 (-)
Gene ID: Rep_1004_c_31_155
Type: TC
Location: 172507 - 175215 (+)
Type: TC
Location: 172507 - 175215 (+)
Gene ID: Rep_1004_c_31_156
Type: CAZyme
Location: 175427 - 177817 (+)
Type: CAZyme
Location: 175427 - 177817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.