Cluster: Rep_1004_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_27 | Rep_1004_c_27_754 | 805939 | 806724 | - | 3.A.1.15.5 |
| TC | Rep_1004_c_27 | Rep_1004_c_27_755 | 806721 | 807479 | - | 3.A.1.15.5 |
| TC | Rep_1004_c_27 | Rep_1004_c_27_756 | 807555 | 808502 | + | 3.A.1.15.5 |
| CAZyme | Rep_1004_c_27 | Rep_1004_c_27_757 | 808524 | 809846 | + | CBM50 |
Gene ID: Rep_1004_c_27_754
Type: TC
Location: 805939 - 806724 (-)
Type: TC
Location: 805939 - 806724 (-)
Gene ID: Rep_1004_c_27_755
Type: TC
Location: 806721 - 807479 (-)
Type: TC
Location: 806721 - 807479 (-)
Gene ID: Rep_1004_c_27_756
Type: TC
Location: 807555 - 808502 (+)
Type: TC
Location: 807555 - 808502 (+)
Gene ID: Rep_1004_c_27_757
Type: CAZyme
Location: 808524 - 809846 (+)
Type: CAZyme
Location: 808524 - 809846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.