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Cluster: Rep_1004_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1004_c_27 Rep_1004_c_27_342 376362 378557 - AA2
sulfatase Rep_1004_c_27 Rep_1004_c_27_343 378817 380241 - S1_6
peptidase Rep_1004_c_27 Rep_1004_c_27_344 380441 381271 + S33.UPW
TC Rep_1004_c_27 Rep_1004_c_27_345 381339 382391 - 1.B.1.1.8
pfam Rep_1004_c_27 Rep_1004_c_27_346 382446 383291 - Amidase_3
TC Rep_1004_c_27 Rep_1004_c_27_347 383611 384981 + 2.A.1.3.17
NULL(UNKNOWN) Rep_1004_c_27 Rep_1004_c_27_348 384998 385396 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_1004_c_27 Rep_1004_c_27_349 385443 386519 + Peripla_BP_2
TC Rep_1004_c_27 Rep_1004_c_27_350 386562 387572 + 3.A.1.14.11
TC Rep_1004_c_27 Rep_1004_c_27_351 387559 388326 + 3.A.1.14.11
Gene ID: Rep_1004_c_27_342
Type: CAZyme
Location: 376362 - 378557 (-)
Gene ID: Rep_1004_c_27_343
Type: sulfatase
Location: 378817 - 380241 (-)
Gene ID: Rep_1004_c_27_344
Type: peptidase
Location: 380441 - 381271 (+)
Gene ID: Rep_1004_c_27_345
Type: TC
Location: 381339 - 382391 (-)
Gene ID: Rep_1004_c_27_346
Type: pfam
Location: 382446 - 383291 (-)
Gene ID: Rep_1004_c_27_347
Type: TC
Location: 383611 - 384981 (+)
Gene ID: Rep_1004_c_27_348
Type:
Location: 384998 - 385396 (+)
Gene ID: Rep_1004_c_27_349
Type: STP
Location: 385443 - 386519 (+)
Gene ID: Rep_1004_c_27_350
Type: TC
Location: 386562 - 387572 (+)
Gene ID: Rep_1004_c_27_351
Type: TC
Location: 387559 - 388326 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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