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Cluster: Rep_1004_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1004_c_27 Rep_1004_c_27_77 83112 85568 + 1.B.55.1.1
CAZyme Rep_1004_c_27 Rep_1004_c_27_78 85579 87585 + CE4 | GH153
CAZyme Rep_1004_c_27 Rep_1004_c_27_79 87582 88916 + GT2
pfam Rep_1004_c_27 Rep_1004_c_27_80 88913 89353 + PgaD
pfam Rep_1004_c_27 Rep_1004_c_27_81 89350 89805 - DUF805
CAZyme Rep_1004_c_27 Rep_1004_c_27_82 90085 91173 + GH103
TC Rep_1004_c_27 Rep_1004_c_27_83 91230 92381 - 1.B.1.1.18
NULL(UNKNOWN) Rep_1004_c_27 Rep_1004_c_27_84 92778 93068 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1004_c_27 Rep_1004_c_27_85 93115 94038 + 2.A.7.3.29
Gene ID: Rep_1004_c_27_77
Type: TC
Location: 83112 - 85568 (+)
Gene ID: Rep_1004_c_27_78
Type: CAZyme
Location: 85579 - 87585 (+)
Gene ID: Rep_1004_c_27_79
Type: CAZyme
Location: 87582 - 88916 (+)
Gene ID: Rep_1004_c_27_80
Type: pfam
Location: 88913 - 89353 (+)
Gene ID: Rep_1004_c_27_81
Type: pfam
Location: 89350 - 89805 (-)
Gene ID: Rep_1004_c_27_82
Type: CAZyme
Location: 90085 - 91173 (+)
Gene ID: Rep_1004_c_27_83
Type: TC
Location: 91230 - 92381 (-)
Gene ID: Rep_1004_c_27_84
Type:
Location: 92778 - 93068 (+)
Gene ID: Rep_1004_c_27_85
Type: TC
Location: 93115 - 94038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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