Cluster: Rep_1004_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1004_c_26 | Rep_1004_c_26_59 | 62261 | 64753 | + | GT51 |
| TC | Rep_1004_c_26 | Rep_1004_c_26_60 | 65005 | 67203 | + | 1.B.14.1.2 |
| TC | Rep_1004_c_26 | Rep_1004_c_26_61 | 67251 | 68048 | + | 3.A.1.14.3 |
| TC | Rep_1004_c_26 | Rep_1004_c_26_62 | 68048 | 68956 | + | 3.A.1.14.3 |
| TC | Rep_1004_c_26 | Rep_1004_c_26_63 | 68953 | 70941 | + | 3.A.1.14.3 |
| TC | Rep_1004_c_26 | Rep_1004_c_26_64 | 71250 | 71405 | + | 1.E.53.1.7 |
Gene ID: Rep_1004_c_26_59
Type: CAZyme
Location: 62261 - 64753 (+)
Type: CAZyme
Location: 62261 - 64753 (+)
Gene ID: Rep_1004_c_26_60
Type: TC
Location: 65005 - 67203 (+)
Type: TC
Location: 65005 - 67203 (+)
Gene ID: Rep_1004_c_26_61
Type: TC
Location: 67251 - 68048 (+)
Type: TC
Location: 67251 - 68048 (+)
Gene ID: Rep_1004_c_26_62
Type: TC
Location: 68048 - 68956 (+)
Type: TC
Location: 68048 - 68956 (+)
Gene ID: Rep_1004_c_26_63
Type: TC
Location: 68953 - 70941 (+)
Type: TC
Location: 68953 - 70941 (+)
Gene ID: Rep_1004_c_26_64
Type: TC
Location: 71250 - 71405 (+)
Type: TC
Location: 71250 - 71405 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.