Cluster: Rep_1004_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1004_c_17 | Rep_1004_c_17_312 | 322960 | 324756 | + | GH3 |
| pfam | Rep_1004_c_17 | Rep_1004_c_17_313 | 324875 | 326161 | + | GHL10 |
| TC | Rep_1004_c_17 | Rep_1004_c_17_314 | 326213 | 327511 | - | 2.A.1.36.1 |
Gene ID: Rep_1004_c_17_312
Type: CAZyme
Location: 322960 - 324756 (+)
Type: CAZyme
Location: 322960 - 324756 (+)
Gene ID: Rep_1004_c_17_313
Type: pfam
Location: 324875 - 326161 (+)
Type: pfam
Location: 324875 - 326161 (+)
Gene ID: Rep_1004_c_17_314
Type: TC
Location: 326213 - 327511 (-)
Type: TC
Location: 326213 - 327511 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.