Cluster: Rep_1004_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_15 | Rep_1004_c_15_116 | 132721 | 133710 | - | 3.A.1.5.27 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_117 | 133707 | 134687 | - | 3.A.1.5.27 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_118 | 134703 | 135605 | - | 3.A.1.5.39 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_119 | 135617 | 136636 | - | 3.A.1.5.39 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_120 | 136807 | 138414 | - | 3.A.1.5.27 |
| CAZyme | Rep_1004_c_15 | Rep_1004_c_15_121 | 139016 | 140707 | - | GH18 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_122 | 141329 | 142660 | - | 2.A.1.4.4 |
Gene ID: Rep_1004_c_15_116
Type: TC
Location: 132721 - 133710 (-)
Type: TC
Location: 132721 - 133710 (-)
Gene ID: Rep_1004_c_15_117
Type: TC
Location: 133707 - 134687 (-)
Type: TC
Location: 133707 - 134687 (-)
Gene ID: Rep_1004_c_15_118
Type: TC
Location: 134703 - 135605 (-)
Type: TC
Location: 134703 - 135605 (-)
Gene ID: Rep_1004_c_15_119
Type: TC
Location: 135617 - 136636 (-)
Type: TC
Location: 135617 - 136636 (-)
Gene ID: Rep_1004_c_15_120
Type: TC
Location: 136807 - 138414 (-)
Type: TC
Location: 136807 - 138414 (-)
Gene ID: Rep_1004_c_15_121
Type: CAZyme
Location: 139016 - 140707 (-)
Type: CAZyme
Location: 139016 - 140707 (-)
Gene ID: Rep_1004_c_15_122
Type: TC
Location: 141329 - 142660 (-)
Type: TC
Location: 141329 - 142660 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.