Cluster: Rep_1004_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_15 | Rep_1004_c_15_105 | 114547 | 115833 | - | 2.A.23.1.7 |
| STP | Rep_1004_c_15 | Rep_1004_c_15_106 | 116107 | 118113 | - | EAL | GGDEF |
| TC | Rep_1004_c_15 | Rep_1004_c_15_107 | 118344 | 121817 | - | 1.B.55.3.1 |
| CAZyme | Rep_1004_c_15 | Rep_1004_c_15_108 | 121799 | 122902 | - | GH8 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_109 | 122917 | 125223 | - | 4.D.3.1.6 |
| CAZyme | Rep_1004_c_15 | Rep_1004_c_15_110 | 125286 | 127889 | - | GT2 |
Gene ID: Rep_1004_c_15_105
Type: TC
Location: 114547 - 115833 (-)
Type: TC
Location: 114547 - 115833 (-)
Gene ID: Rep_1004_c_15_106
Type: STP
Location: 116107 - 118113 (-)
Type: STP
Location: 116107 - 118113 (-)
Gene ID: Rep_1004_c_15_107
Type: TC
Location: 118344 - 121817 (-)
Type: TC
Location: 118344 - 121817 (-)
Gene ID: Rep_1004_c_15_108
Type: CAZyme
Location: 121799 - 122902 (-)
Type: CAZyme
Location: 121799 - 122902 (-)
Gene ID: Rep_1004_c_15_109
Type: TC
Location: 122917 - 125223 (-)
Type: TC
Location: 122917 - 125223 (-)
Gene ID: Rep_1004_c_15_110
Type: CAZyme
Location: 125286 - 127889 (-)
Type: CAZyme
Location: 125286 - 127889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.